CDS

Accession Number TCMCG007C09114
gbkey CDS
Protein Id XP_009114642.1
Location complement(join(24488541..24488713,24488838..24488915,24489027..24489091,24489225..24489302,24489383..24489449,24489549..24489609,24489726..24489809,24489897..24489998,24490100..24490185,24490296..24490359,24490603..24490698,24490841..24490925,24491102..24491170,24491286..24491325,24491328..24491354,24491431..24491530,24491619..24491643,24491728..24491843))
Gene LOC103839906
GeneID 103839906
Organism Brassica rapa

Protein

Length 472aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009116394.3
Definition LOW QUALITY PROTEIN: protein pleiotropic regulatory locus 1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category A
Description Pleiotropic regulatory locus
KEGG_TC -
KEGG_Module M00353        [VIEW IN KEGG]
M00355        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K12862        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000151        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0000974        [VIEW IN EMBL-EBI]
GO:0002218        [VIEW IN EMBL-EBI]
GO:0002253        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002684        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009617        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009743        [VIEW IN EMBL-EBI]
GO:0009746        [VIEW IN EMBL-EBI]
GO:0009749        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009756        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009870        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010182        [VIEW IN EMBL-EBI]
GO:0010204        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031349        [VIEW IN EMBL-EBI]
GO:0031461        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034284        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042742        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045088        [VIEW IN EMBL-EBI]
GO:0045089        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048825        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050778        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050832        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071011        [VIEW IN EMBL-EBI]
GO:0071013        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071322        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080008        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACGACGGAGATCGAGCCACAGTCACTGCAAAAGCTGAGTCACAAATCAGTGAAGCGAGCTCTTGATCTTTTCTCCCCCGCTCGTGATCAACTCGCTCCGCCTGATCCAGAAAGCAAAAAAGTTCGGCTCTCTCATAAGATTCAAGTTGCGTTTGGAGGTGTAGAGCCAGTGAGTAAGCAGCATATACGTAAGGCTGAGCATAACAATGAGCAGATAGCTCCATCCAATGCCCTTCCAGGTCAAGAAGGAGCCAAGGAAGTTCAAAGTTTAGCTGTTGTTGGTCCTACTTTACCGCCAAGAAGCTTGAACGACAACACTGTTCACGCAGGCAAAAGCACCACTGTTCTTCCTGCATTTGGATCCTCATCTGAAAGAAACCTGTCAACTTCTGCTTTAATGGAGAGAATACCTAGTCGATGGCCCCGTCCAGAGTGGCATGCACCATGGAAGTATTACAGGGTGATCCAGGGGGGGCACTTGGGCTGGGTTAGATCTGTTGCATTTGACTCAAGTAATGATTGGTTTTGCACTGGTTCTGCTGATCGTACCATTAAGGTATGGGATGTAGCGAGTGGAGTTCTGAAGCACACACTTACTGGACATATTGGGCAAGTACGAGGCCTCGCTGTAAGCAACCAACATAGCTATATTTTCTCTGCTGGTGATGACAAGCAAGTCAAATGCTGGGACCTTGAGCAGAATAAGGTTATCCGATCTTATCATGGTCACTTGAGTGGAGTCTATTGCTTAGCTCTTCAGCCAACTCTGGACGTTGTACTAACCGGAGGGCGAGACTCTGTCTGCAGGGTGTGGGATATCCGTACGAAGGTGCAGACGTTTGCACTCTCGGGACACGACAAAGACGTTTGTTCCGTTTTCACCCGTCCAACCGACCCACAAGTTGTTACCGGTTCTCATGATTCGACCATTAAATTTTGGGACCTTCGATATGGTAGAACAATGGCAACTCTAACGAATCATAAGAAAGCTGTCCGAGCAATGGTGCTTCATCCGAAAGAGAATGCTTTTGTTTCTGCATCCGTTGATAACATCAAGAAGTTTAGCCTTCCTAAGGGAGAGTTTCGCCACAACATGCTTTCTCAGCAAAGAGCCACAATCAACGCAGTGGCTGTGAATGAGGATGGTGTAATGGTCACTGGAGGTGATAATGGAAGCTTATGGTTCTGGGATTGGAAGAGTGGTCACAGTTTCCAACAGGCAAAAACCATTGTACAGCCTGGTTCGCTGGAGAGTGAAGCTGGTATATATGCAGCGTGTTACGATCAGACGGGTTCAAGGCTGGTAACGTGTGAGGCAGACAAGACCATAAAGATGTGGAAGGAAGACGAGAACGCAACTCCTGAAACCCATCCTCTTAACTTCAGACCTCCCAAAGAGATCAGACGCTTCTGA
Protein:  
MTTEIEPQSLQKLSHKSVKRALDLFSPARDQLAPPDPESKKVRLSHKIQVAFGGVEPVSKQHIRKAEHNNEQIAPSNALPGQEGAKEVQKXLAVVGPTLPPRSLNDNTVHAGKSTTVLPAFGSSSERNLSTSALMERIPSRWPRPEWHAPWKYYRVIQGGHLGWVRSVAFDSSNDWFCTGSADRTIKVWDVASGVLKHTLTGHIGQVRGLAVSNQHSYIFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALQPTLDVVLTGGRDSVCRVWDIRTKVQTFALSGHDKDVCSVFTRPTDPQVVTGSHDSTIKFWDLRYGRTMATLTNHKKAVRAMVLHPKENAFVSASVDNIKKFSLPKGEFRHNMLSQQRATINAVAVNEDGVMVTGGDNGSLWFWDWKSGHSFQQAKTIVQPGSLESEAGIYAACYDQTGSRLVTCEADKTIKMWKEDENATPETHPLNFRPPKEIRRF